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1

Steroid hormone regulation of gene expression

Gorski, Jack, Seyfred, Mark A., Kladde, Michael P., Meier, Daniel A., Murdoch, Fern E.

Journal:

Journal of Animal Science

Year:

1990

Language:

english

File:

PDF, 710 KB

english, 1990

2

Single-molecule analysis of chromatin: Changing the view of genomes one molecule at a time

Santhi Pondugula, Michael P. Kladde

Journal:

Journal of Cellular Biochemistry

Year:

2008

Language:

english

File:

PDF, 188 KB

english, 2008

3

Active PHO5 chromatin encompasses variable numbers of nucleosomes at individual promoters

Jessen, Walter J, Hoose, Scott A, Kilgore, Jessica A, Kladde, Michael P

Journal:

Nature Structural and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 502 KB

english, 2006

4

Fibroblast Growth Factor Receptor 2 Homodimerization Rapidly Reduces Transcription of the Pluripotency Gene Nanog without Dissociation of Activating Transcription Factors

Santostefano, K. E., Hamazaki, T., Pardo, C. E., Kladde, M. P., Terada, N.

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 1.83 MB

english, 2012

5

Multiple Transitions to Non-B-DNA Structures Occur in the Distal Regulatory Region of the Rat Prolactin Gene

Michael P. Kladde, Jonathan D'Cunha, Jack Gorski

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 1.92 MB

1993

6

Conserved properties of HP1Hsα

Laura E Norwood, Stephanie K Grade, Diane E Cryderman, Karrie A Hines, Nicholas Furiasse, Rafael Toro, Yuhong Li, Archana Dhasarathy, Michael P Kladde, Mary J.C Hendrix, Dawn A Kirschmann, Lori L Wall

Journal:

Year:

2004

Language:

english

File:

PDF, 501 KB

english, 2004

7

SWI/SNF Has Intrinsic Nucleosome Disassembly Activity that Is Dependent on Adjacent Nucleosomes

Mekonnen Lemma Dechassa, Abdellah Sabri, Santhi Pondugula, Stefan R. Kassabov, Nilanjana Chatterjee, Michael P. Kladde, Blaine Bartholomew

Journal:

Year:

2010

Language:

english

File:

PDF, 701 KB

english, 2010

8

Mapping chromatin structure in vivo using DNA methyltransferases

Walter J Jessen, Archana Dhasarathy, Scott A Hoose, Christopher D Carvin, April L Risinger, Michael P Kladde

Journal:

Year:

2004

Language:

english

File:

PDF, 1.66 MB

english, 2004

9

Single-molecule and population probing of chromatin structure using DNA methyltransferases

Jessica A. Kilgore, Scott A. Hoose, Tanya L. Gustafson, Weston Porter, Michael P. Kladde

Journal:

Year:

2007

Language:

english

File:

PDF, 389 KB

english, 2007

10

Interaction between transcription regulatory regions of prolactin chromatin

Cullen, K., Kladde, M., Seyfred, M.

Journal:

Year:

1993

Language:

english

File:

PDF, 1.66 MB

english, 1993

11

[Methods in Enzymology] RNA Polymerase and Associated Factors, Part B Volume 274 || Chromatin structure mapping in vivo using methyltransferases

Kladde, Michael P.

Year:

1996

Language:

english

File:

PDF, 1.91 MB

english, 1996

12

Microbiota impact on the epigenetic regulation of colorectal cancer

Yang, Tao, Owen, Jennifer L., Lightfoot, Yaíma L., Kladde, Michael P., Mohamadzadeh, Mansour

Journal:

Trends in Molecular Medicine

Year:

2013

Language:

english

File:

PDF, 2.93 MB

english, 2013

13

Local Depletion of DNA Methylation Identifies a Repressive p53 Regulatory Region in the NEK2 Promoter

Nabilsi, N. H., Ryder, D. J., Peraza-Penton, A. C., Poudyal, R., Loose, D. S., Kladde, M. P.

Journal:

Journal of Biological Chemistry

Year:

2013

Language:

english

File:

PDF, 1.46 MB

english, 2013

14

TRIM29 Suppresses TWIST1 and Invasive Breast Cancer Behavior

Ai, L., Kim, W.-J., Alpay, M., Tang, M., Pardo, C. E., Hatakeyama, S., May, W. S., Kladde, M. P., Heldermon, C. D., Siegel, E. M., Brown, K. D.

Journal:

Cancer Research

Year:

2014

Language:

english

File:

PDF, 1.45 MB

english, 2014

15

Restraint of angiogenesis by zinc finger transcription factor CTCF-dependent chromatin insulation

Tang, M., Chen, B., Lin, T., Li, Z., Pardo, C., Pampo, C., Chen, J., Lien, C.-L., Wu, L., Ai, L., Wang, H., Yao, K., Oh, S. P., Seto, E., Smith, L. E. H., Siemann, D. W., Kladde, M. P., Cepko, C. L.,

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 486 KB

english, 2011

16

Polyphosphate Loss Promotes SNF/SWI- and Gcn5-Dependent Mitotic Induction of PHO5

Neef, D. W., Kladde, M. P.

Journal:

Molecular and Cellular Biology

Year:

2003

Language:

english

File:

PDF, 417 KB

english, 2003

17

Mechanisms of Transcriptional Activation of bcl-2Gene Expression by 17 -Estradiol in Breast Cancer Cells

Dong, L., Wang, W., Wang, F., Stoner, M., Reed, J. C., Harigai, M., Samudio, I., Kladde, M. P., Vyhlidal, C., Safe, S.

Journal:

Journal of Biological Chemistry

Year:

1999

Language:

english

File:

PDF, 352 KB

english, 1999

18

The non-B-DNA structure of d(CA/TG)n differs from that of Z-DNA.

Kladde, M. P., Kohwi, Y., Kohwi-Shigematsu, T., Gorski, J.

Journal:

Proceedings of the National Academy of Sciences

Year:

1994

Language:

english

File:

PDF, 1.52 MB

english, 1994

19

Targeted cytosine methylation for in vivo detection of protein-DNA interactions

Carvin, C. D., Dhasarathy, A., Friesenhahn, L. B., Jessen, W. J., Kladde, M. P.

Journal:

Proceedings of the National Academy of Sciences

Year:

2003

Language:

english

File:

PDF, 587 KB

english, 2003

20

Epigenetic diversity of Kaposi's sarcoma-associated herpesvirus

Darst, R. P., Haecker, I., Pardo, C. E., Renne, R., Kladde, M. P.

Journal:

Nucleic Acids Research

Year:

2013

Language:

english

File:

PDF, 1.01 MB

english, 2013

21

Effectors of Lysine 4 Methylation of Histone H3 in Saccharomyces cerevisiae Are Negative Regulators of PHO5 and GAL1-10

Carvin, C. D., Kladde, M. P.

Journal:

Journal of Biological Chemistry

Year:

2004

Language:

english

File:

PDF, 687 KB

english, 2004

22

Promoter Occupancy Is a Major Determinant of Chromatin Remodeling Enzyme Requirements

Dhasarathy, A., Kladde, M. P.

Journal:

Molecular and Cellular Biology

Year:

2005

Language:

english

File:

PDF, 430 KB

english, 2005

23

Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma

Nabilsi, N. H., Deleyrolle, L. P., Darst, R. P., Riva, A., Reynolds, B. A., Kladde, M. P.

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.62 MB

english, 2014

24

MethylViewer: computational analysis and editing for bisulfite sequencing and methyltransferase accessibility protocol for individual templates (MAPit) projects

Pardo, C. E., Carr, I. M., Hoffman, C. J., Darst, R. P., Markham, A. F., Bonthron, D. T., Kladde, M. P.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 14.22 MB

english, 2011

25

Positioned nucleosomes inhibit Dam methylation in vivo.

Kladde, M. P., Simpson, R. T.

Journal:

Proceedings of the National Academy of Sciences

Year:

1994

Language:

english

File:

PDF, 1.44 MB

english, 1994

26

Rapid detection of functional expression of C-5-DNA methyltransferases in yeast

Journal:

Nucleic Acids Research

Year:

1998

Language:

english

File:

PDF, 54 KB

english, 1998

27

WIF1 is a frequent target for epigenetic silencing in squamous cell carcinoma of the cervix

Delmas, A. L., Riggs, B. M., Pardo, C. E., Dyer, L. M., Darst, R. P., Izumchenko, E. G., Monroe, M., Hakam, A., Kladde, M. P., Siegel, E. M., Brown, K. D.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.76 MB

english, 2011

28

Coupling Phosphate Homeostasis to Cell Cycle-Specific Transcription: Mitotic Activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead Proteins

Pondugula, S., Neef, D. W., Voth, W. P., Darst, R. P., Dhasarathy, A., Reynolds, M. M., Takahata, S., Stillman, D. J., Kladde, M. P.

Journal:

Molecular and Cellular Biology

Year:

2009

Language:

english

File:

PDF, 3.65 MB

english, 2009

29

Promoter Occupancy Is a Major Determinant of Chromatin Remodeling Enzyme Requirements

Dhasarathy, A., Kladde, M. P.

Journal:

Molecular and Cellular Biology

Year:

2006

File:

PDF, 17 KB

2006

30

Transcriptional Activation of Deoxyribonucleic Acid Polymeraseα Gene Expression in MCF-7 Cells by 17β-Estradiol 1

Samudio, Ismael, Vyhlidal, Carrie, Wang, Fan, Stoner, Matthew, Chen, Ichen, Kladde, Michael, Barhoumi, Rola, Burghardt, Robert, Safe, Stephen

Journal:

Year:

2001

Language:

english

File:

PDF, 446 KB

english, 2001

31

Human Lymphoid Translocation Fragile Zones Are Hypomethylated and Have Accessible Chromatin

Lu, Zhengfei, Lieber, Michael R., Tsai, Albert G., Pardo, Carolina E., Müschen, Markus, Kladde, Michael P., Hsieh, Chih-Lin

Journal:

Molecular and Cellular Biology

Year:

2015

Language:

english

File:

PDF, 5.36 MB

english, 2015

32

Transcriptional Regulation by Estrogen of Episomal Prolactin Gene Regulatory Elements

Seyfred, Mark A., Kladde, Michael P., Gorski, Jack

Journal:

Molecular Endocrinology

Year:

1989

Language:

english

File:

PDF, 2.25 MB

english, 1989

33

The Non-B-DNA Structure of d(CA/TG)nDiffers from that of Z-DNA

Michael P. Kladde, Yoshinori Kohwi, Terumi Kohwi-Shigematsu and Jack Gorski

Journal:

Proceedings of the National Academy of Sciences

Year:

1994

Language:

english

File:

PDF, 1.57 MB

english, 1994

34

Transcriptional Activation of c- fos Protooncogene by 17β-Estradiol: Mechanism of Aryl Hydrocarbon Receptor-Mediated Inhibition

Duan, Renqin, Porter, Weston, Samudio, Ismael, Vyhlidal, Carrie, Kladde, Michael, Safe, Stephen

Journal:

Molecular Endocrinology

Year:

1999

Language:

english

File:

PDF, 1.43 MB

english, 1999

35

High Fractional Occupancy of a Tandem MARE and its Role in Long-Range β-globin Gene Regulation

Stees, Jared R., Hossain, Mir A., Sunose, Tomoki, Kudo, Yasushi, Pardo, Carolina E., Nabilsi, Nancy H., Darst, Russell P., Poudyal, Rosha, Igarashi, Kazuhiko, Huang, Suming, Kladde, Michael P., Bunger

Journal:

Molecular and Cellular Biology

Year:

2015

Language:

english

File:

PDF, 4.53 MB

english, 2015

36

Positioned Nucleosomes Inhibit Dam Methylation in vivo

Michael P. Kladde and Robert T. Simpson

Journal:

Proceedings of the National Academy of Sciences

Year:

1994

Language:

english

File:

PDF, 1.24 MB

english, 1994

37

CB-07 * DISTINCT RADIATION RESPONSE OF SLOW-DIVIDING CANCER STEM CELLS

Deleyrolle, L., Nabilsi, N., Griffith, B., Pasternack, N., Dajac, K., Patel, J., Rohaus, M., Harding, A., Kladde, M., Steindler, D., Reynolds, B., Siebzehnrubl, F.

Journal:

Year:

2014

File:

PDF, 25 KB

2014

38

CB-07 * DISTINCT RADIATION RESPONSE OF SLOW-DIVIDING CANCER STEM CELLS

Deleyrolle, L., Nabilsi, N., Griffith, B., Pasternack, N., Dajac, K., Patel, J., Rohaus, M., Harding, A., Kladde, M., Steindler, D., Reynolds, B., Siebzehnrubl, F.

Journal:

Year:

2014

Language:

english

File:

PDF, 25 KB

english, 2014

39

PO01DISPARATE RADIATION RESPONSE OF SLOW PROLIFERATING CANCER STEM CELLS

Siebzehnrubl, F.A., Nabilsi, N., Pasternack, N., Rohaus, M., Griffith, B.G., Dajac, K., Patel, J., Harding, A., Kladde, M.P., Steindler, D.A., Reynolds, B.A., Deleyrolle, L.P.

Journal:

Year:

2015

Language:

english

File:

PDF, 25 KB

english, 2015

40

Gal4p-Mediated Chromatin Remodeling Depends on Binding Site Position in Nucleosomes but Does Not Require DNA Replication

Xu, Mai, Simpson, Robert T., Kladde, Michael P.

Journal:

Molecular and Cellular Biology

Year:

1998

Language:

english

File:

PDF, 1.51 MB

english, 1998

41

[Methods in Enzymology] Chromatin Volume 304 || DNA methyltransferases as probes of chromatin structure in vivo

Kladde, Michael P.

Year:

1999

Language:

english

File:

PDF, 2.06 MB

english, 1999

42

Bcl11b is essential for licensing Th2 differentiation during helminth infection and allergic asthma

Lorentsen, Kyle J., Cho, Jonathan J., Luo, Xiaoping, Zuniga, Ashley N., Urban, Joseph F., Zhou, Liang, Gharaibeh, Raad, Jobin, Christian, Kladde, Michael P., Avram, Dorina

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.74 MB

english, 2018

43

Publisher Correction: Bcl11b is essential for licensing Th2 differentiation during helminth infection and allergic asthma

Lorentsen, Kyle J., Cho, Jonathan J., Luo, Xiaoping, Zuniga, Ashley N., Urban, Joseph F., Zhou, Liang, Gharaibeh, Raad, Jobin, Christian, Kladde, Michael P., Avram, Dorina

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 236 KB

english, 2018

44

Direct study of DNA-protein interactions in repressed and active chromatin in living cells.

Kladde, M. P., Xu, M., Simpson, R. T.

Journal:

The EMBO Journal

Year:

1996

Language:

english

File:

PDF, 2.72 MB

english, 1996

45

Steroid hormone regulation of gene expression

Gorski, Jack, Seyfred, Mark A., Kladde, Michael P., Meier, Daniel A., Murdoch, Fern E.

Journal:

Journal of Animal Science

Year:

1990

File:

PDF, 710 KB

1990

46

Exertional heat stroke leads to concurrent longâterm epigenetic memory, immunosuppression and altered heat shock response in female mice

Murray, Kevin O., Brant, Jason O., Iwaniec, John D., Sheikh, Laila H., Carvalho, Lucas, Garcia, Christian K., Robinson, Gerard P., Alzahrani, Jamal, Riva, Alberto, Laitano, Orlando, Kladde, Michael P.

Journal:

The Journal of Physiology

Year:

2020

File:

PDF, 2.36 MB

2020